7880 - 12551 Rattus norvegicus - Deletions Deletion length: 4671 bp

Breakpoint flanking sequences more information in Documentation - Flanking regions

7880 5fl vs 3del Homology length: 1 bp Deleted region 12551 CACCTCCCTCCCCCAAAACT ├ 5'Breakpoint ┤ ATAGCCACAGAAAAAACGAA (...) ACCTCAAACAATAGTACTAT ├ 3'Breakpoint ┤ TATAACAGCCATACTATGTC 5fl vs 3fl Homology length: 1 bp CACCTCCCTCCCCCAAAACT ├ 5'Breakpoint ┤ ATAGCCACAGAAAAAACGAA (...) ACCTCAAACAATAGTACTAT ├ 3'Breakpoint ┤ TATAACAGCCATACTATGTC 5del vs 3del Homology length: 2 bp CACCTCCCTCCCCCAAAACT ├ 5'Breakpoint ┤ ATAGCCACAGAAAAAACGAA (...) ACCTCAAACAATAGTACTAT ├ 3'Breakpoint ┤ TATAACAGCCATACTATGTC

Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.	Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [ 12 ] Jarafi, A., et al., Effect of aerobic exercise training on mtDNA deletion in soleus muscle of trained and untrained Wistar rats.British Journal of Sports Medicine. 2005. 39(8): p. 517-20.