Loading, please wait...

Loading, please wait.



7804 - 13795
Homo sapiens - Deletions

Deletion length: 5990 bp

Does not remove any origin of replication
Inside the major arc



Breakpoint flanking sequences
more information in Documentation - Flanking regions


7804
5fl vs 3del
Homology length: 4 bp

Deleted region


13795
TCCTGCCCGCCATCATCCTA 5'Breakpoint GTCCTCATCGCCCTCCCATC (...) CAACAATCCCCCTCTACCTA 3'Breakpoint AAACTCACAGCCCTCGCTGT
5fl vs 3fl
Homology length: 1 bp

TCCTGCCCGCCATCATCCTA 5'Breakpoint GTCCTCATCGCCCTCCCATC (...) CAACAATCCCCCTCTACCTA 3'Breakpoint AAACTCACAGCCCTCGCTGT




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.
Present in:
Controls
Ulcerative colitis

References

 [20] Fukushima, K. and C. Fiocchi, Paradoxical decrease of mitochondrial DNA deletions in epithelial cells of active ulcerative colitis patients. American Journal of Physiology - Gastrointestinal and Liver Physiology. 2004. 286(5): p. G804-13.