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5940 - 15442
Mus Musculus - Deletions

Deletion length: 9501 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


5940
5fl vs 3del
Homology length: 2 bp

Deleted region


15442
ACTACCAGTGCTAGCCGCAG 5'Breakpoint GCATTACTATACTACTAACA (...) GAGTACATAAATTTACATAG 3'Breakpoint TACAACAGTACATTTATGTA
5del vs 3del
Homology length: 1 bp

ACTACCAGTGCTAGCCGCAG 5'Breakpoint GCATTACTATACTACTAACA (...) GAGTACATAAATTTACATAG 3'Breakpoint TACAACAGTACATTTATGTA




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [15] Fukui, H., Moraes, C. T., Mechanisms of formation and accumulation of mitochondrial DNA deletions in aging neurons.Human Molecular Genetics. 2009. 18(6): p. 1028-36.