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16161 - 16342
Homo sapiens - Deletions

Deletion length: 180 bp

Does not remove any origin of replication
Inside the major arc



Breakpoint flanking sequences
more information in Documentation - Flanking regions


16161
5fl vs 3del
Homology length: 4 bp

Deleted region


16342
CTTGACCACCTGTAGTACAT 5'Breakpoint AAAAACCCAATCCACATCAA (...) ATTTACCGTACATAGCACAT 3'Breakpoint TACAGTCAAATCCCTTCTCG
5fl vs 3fl
Homology length: 1 bp

CTTGACCACCTGTAGTACAT 5'Breakpoint AAAAACCCAATCCACATCAA (...) ATTTACCGTACATAGCACAT 3'Breakpoint TACAGTCAAATCCCTTCTCG




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [310] Blackwood, J. K., et al., In situ lineage tracking of human prostatic epithelial stem cell fate reveals a common clonal origin for basal and luminal cells. Journal of Pathology. 2011. 225: p. 181-188.