9001 - 14495 Mus Musculus - Deletions Deletion length: 5493 bp

Breakpoint flanking sequences more information in Documentation - Flanking regions

9001 5fl vs 3del Homology length: 1 bp Deleted region 14495 CCTCTAGAAGTCCCACTACT ├ 5'Breakpoint ┤ TAATACTTCAGTACTTCTAG (...) GAAACCTGAAACATTGGAGT ├ 3'Breakpoint ┤ ACTTCTACTGTTCGCAGTCA 5fl vs 3fl Homology length: 3 bp CCTCTAGAAGTCCCACTACT ├ 5'Breakpoint ┤ TAATACTTCAGTACTTCTAG (...) GAAACCTGAAACATTGGAGT ├ 3'Breakpoint ┤ ACTTCTACTGTTCGCAGTCA 5del vs 3del Homology length: 1 bp CCTCTAGAAGTCCCACTACT ├ 5'Breakpoint ┤ TAATACTTCAGTACTTCTAG (...) GAAACCTGAAACATTGGAGT ├ 3'Breakpoint ┤ ACTTCTACTGTTCGCAGTCA

Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.	Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [13] Bacman, S. R., et al., Intra- and inter-molecular recombination of mitochondrial DNA after in vivo induction of multiple double-strand breaks.Nucleic Acids Research. 2009. 37(13): p. 4218-26.