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478 - 5160
Homo sapiens - Deletions

Deletion length: 4681 bp

Does not remove any origin of replication
Inside the minor arc



Breakpoint flanking sequences
more information in Documentation - Flanking regions


478
5fl vs 3del
Homology length: 8 bp

Deleted region


5160
CTCCCACTCCCATACTACTA 5'Breakpoint ATCTCATCAATACAACCCCC (...) GCACCACGACCCTACTACTA 3'Breakpoint TCTCGCACCTGAAACAAGCT
5del vs 3del
Homology length: 1 bp

CTCCCACTCCCATACTACTA 5'Breakpoint ATCTCATCAATACAACCCCC (...) GCACCACGACCCTACTACTA 3'Breakpoint TCTCGCACCTGAAACAAGCT




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [58] Johns, D.R. and D.R. Cornblath, Molecular insight into the asymmetric distribution of pathogenetic human mitochondrial DNA deletions. Biochemical and Biophysical Research Communications. 1991. 174(1): p. 244-50.

 [265] Rocher, C., et al., Base composition at mtDNA boundaries suggests a DNA triple helix model for human mitochondrial DNA large-scale rearrangements. Molecular Genetics and Metabolism. 2002. 76(2): p. 123-32.