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2060 - 4580
Drosophila melanogaster - Deletions

Deletion length: 2519 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


2060
5fl vs 3del
Homology length: 1 bp

Deleted region


4580
GCTTTATTATTATTATTATC 5'Breakpoint ACTTCCAGTACTAGCAGGAG (...) GCTGGACATTTATTATTAAC 3'Breakpoint TCTTTTAGGAAATACAGGAT
5fl vs 3fl
Homology length: 2 bp

GCTTTATTATTATTATTATC 5'Breakpoint ACTTCCAGTACTAGCAGGAG (...) GCTGGACATTTATTATTAAC 3'Breakpoint TCTTTTAGGAAATACAGGAT
5del vs 3del
Homology length: 2 bp

GCTTTATTATTATTATTATC 5'Breakpoint ACTTCCAGTACTAGCAGGAG (...) GCTGGACATTTATTATTAAC 3'Breakpoint TCTTTTAGGAAATACAGGAT




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [1] Yui, R., Matsuura, E.T., Detection of deletions flanked by short direct repeats in mitochondrial DNA of aging Drosophila.Mutation Research. 2006. 594(1-2): p. 155-61.