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8896 - 13139
Mus Musculus - Deletions

Deletion length: 4242 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


8896
5fl vs 3del
Homology length: 13 bp

Deleted region


13139
GTATTTTTCTTTGCAGGATT 5'Breakpoint CTTCTGAGCGTTCTATCATT (...) GGAAGCATCTTTGCAGGATT 3'Breakpoint TGTCATCTCATATAATATTC
5fl vs 3fl
Homology length: 1 bp

GTATTTTTCTTTGCAGGATT 5'Breakpoint CTTCTGAGCGTTCTATCATT (...) GGAAGCATCTTTGCAGGATT 3'Breakpoint TGTCATCTCATATAATATTC




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [5] Wang, E., et al., The rate of mitochondrial mutagenesis is faster in mice than humans.Mutation Research. 1997. 377(2): p. 157-66.

 [18] Brossas, J. Y., et al., Multiple deletions in mitochondrial DNA are present in senescent mouse brain.Biochemical and Biophysical Research Communications. 1994. 202(2): p. 654-9.

 [21] Zeng, Z., et al., Mitochondrial DNA deletions are associated with ischemia and aging in Balb/c mouse brain.Journal of Cellular Biochemistry. 1999. 73(4): p. 545-53.