Loading, please wait...

Loading, please wait.



8428 - 15482
Homo sapiens - Deletions

Deletion length: 7053 bp

Does not remove any origin of replication
Inside the major arc



Breakpoint flanking sequences
more information in Documentation - Flanking regions


8428
5fl vs 3del
Homology length: 9 bp

Deleted region


15482
CCATACTCCTTACACTATTC 5'Breakpoint CTCATCACCCAACTAAAAAT (...) TAATGACATTAACACTATTC 3'Breakpoint TCACCAGACCTCCTAGGCGA
5fl vs 3fl
Homology length: 2 bp

CCATACTCCTTACACTATTC 5'Breakpoint CTCATCACCCAACTAAAAAT (...) TAATGACATTAACACTATTC 3'Breakpoint TCACCAGACCTCCTAGGCGA
5del vs 3del
Homology length: 1 bp

CCATACTCCTTACACTATTC 5'Breakpoint CTCATCACCCAACTAAAAAT (...) TAATGACATTAACACTATTC 3'Breakpoint TCACCAGACCTCCTAGGCGA




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.
Present in:
Parkinson Disease
Hippocampal tissue of patients with mesial temporal lobe epilepsy (mTLE) and hippocampal sclerosis (HS)

References

 [33] Reeve, A.K., et al., Nature of mitochondrial DNA deletions in substantia nigra neurons. American Journal of Human Genetics. 2008. 82(1): p. 228-35.

 [330] Volmering, E., et al., Neuropathological signs of inflammation correlate with mitochondrial DNA deletions in mesial temporal lobe epilepsy. Acta Neuropathologica. 2016. 132(2): p. 277-288.