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7658 - 15141
Rattus norvegicus - Deletions

Deletion length: 7483 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


7658
5fl vs 3del
Homology length: 2 bp

Deleted region


15141
GAAATAGTCCCTCTAAAATA 5'Breakpoint TTTCGAAAACTGATCAGCTT (...) TAGCCAACCTCCTAATCTTA 3'Breakpoint ACATGAATCGGAGGCCAACC
5fl vs 3fl
Homology length: 1 bp

GAAATAGTCCCTCTAAAATA 5'Breakpoint TTTCGAAAACTGATCAGCTT (...) TAGCCAACCTCCTAATCTTA 3'Breakpoint ACATGAATCGGAGGCCAACC




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [ 2 ] Van Tuyle, G. C., et al., Multiple, large deletions in rat mitochondrial DNA: evidence for a major hot spot.Mutation Research. 1996. 349(1): p. 95-107.