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5694 - 15423
Mus Musculus - Deletions

Deletion length: 9728 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


5694
5fl vs 3del
Homology length: 1 bp

Deleted region


15423
AATAGTAGAAGCAGGAGCAG 5'Breakpoint GAACAGGATGAACAGTCTAC (...) TCTAATTAAACTACTTCTTG 3'Breakpoint AGTACATAAATTTACATAGT
5fl vs 3fl
Homology length: 2 bp

AATAGTAGAAGCAGGAGCAG 5'Breakpoint GAACAGGATGAACAGTCTAC (...) TCTAATTAAACTACTTCTTG 3'Breakpoint AGTACATAAATTTACATAGT
5del vs 3del
Homology length: 1 bp

AATAGTAGAAGCAGGAGCAG 5'Breakpoint GAACAGGATGAACAGTCTAC (...) TCTAATTAAACTACTTCTTG 3'Breakpoint AGTACATAAATTTACATAGT




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [13] Bacman, S. R., et al., Intra- and inter-molecular recombination of mitochondrial DNA after in vivo induction of multiple double-strand breaks.Nucleic Acids Research. 2009. 37(13): p. 4218-26.