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5173 - 15607
Homo sapiens - Deletions

Deletion length: 10433 bp

Removes OL
Removing part of minor and major arcs



Breakpoint flanking sequences
more information in Documentation - Flanking regions


5173
5fl vs 3del
Homology length: 2 bp

Deleted region


15607
CTACTATCTCGCACCTGAAA 5'Breakpoint CAAGCTAACATGACTAACAC (...) CTCCGATCCGTCCCTAACAA 3'Breakpoint ACTAGGAGGCGTCCTTGCCC
5fl vs 3fl
Homology length: 1 bp

CTACTATCTCGCACCTGAAA 5'Breakpoint CAAGCTAACATGACTAACAC (...) CTCCGATCCGTCCCTAACAA 3'Breakpoint ACTAGGAGGCGTCCTTGCCC
5del vs 3del
Homology length: 3 bp

CTACTATCTCGCACCTGAAA 5'Breakpoint CAAGCTAACATGACTAACAC (...) CTCCGATCCGTCCCTAACAA 3'Breakpoint ACTAGGAGGCGTCCTTGCCC




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [290] Nicholas, A., et al., On the timing and the extent of clonal expansion of mtDNA deletions: evidence from single-molecule PCR. Experimental Neurology. 2009. 218(2): p. 316-9.