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2074 - 8040
Caenorhabditis elegans - Deletions

Deletion length: 5965 bp

Breakpoint flanking sequences
more information in Documentation - Flanking regions


2074
5fl vs 3del
Homology length: 8 bp

Deleted region


8040
TTAGTTTTGAGTATTCAGTT 5'Breakpoint TTATTTTTTTTATGTTTAAT (...) GACAGTTGTATAATTCAGTT 3'Breakpoint ATTACAGCTCATGCTATTTT
5del vs 3del
Homology length: 2 bp

TTAGTTTTGAGTATTCAGTT 5'Breakpoint TTATTTTTTTTATGTTTAAT (...) GACAGTTGTATAATTCAGTT 3'Breakpoint ATTACAGCTCATGCTATTTT




Two-dimensional scatterplot showing the location of the selected deletion (red diamond) versus the full dataset (grey dots). Each point represents an mtDNA rearrangement with the 5’ breakpoint on the x-axis and the 3’ breakpoint on the y-axis.

Circular mtDNA plot specifying the location of the deleted region (black bar).
Length distribution of the deleted region in the selected deletion (red bar) versus the full dataset (grey bars) .The cases were grouped 100-nt windows.

References

 [1] Melov, S., et al., Increased frequency of deletions in the mitochondrial genome with age of Caenorhabditis elegans.Nucleic Acids Research. 1995. 23(8): p. 1419-25.